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Workshops
UVA Research Computing provides training opportunities covering a variety of data analysis, basic programming and computational topics. All of the classes listed below are taught by experts and are freely available to UVa faculty, staff and students.
Upcoming Workshops DATE WORKSHOP INSTRUCTOR Jun 3, 2024
Introduction to the Command Line for HPCPaul Orndorff, Hana Parece Jun 3, 2024
High Performance PythonCamden Duy, Katherine Holcomb Jun 4, 2024
Introduction to GPU Accelerated PythonAngela Boakye Danquah, Hana Parece Jun 5, 2024
Introduction to Deep Learning with HPCAngela Boakye Danquah, Kathryn Linehan Jun 6, 2024
education,
workshops
bioinformatics,
containers,
HPC,
image processing,
Ivy,
Matlab,
programming,
Python,
R,
Rivanna,
Shiny
LOLAweb
The past few years have seen an explosion of interest in understanding the role of regulatory DNA. This interest has driven large-scale production of functional genomics data resources and analytical methods. One popular analysis is to test for enrichment of overlaps between a query set of genomic regions and a database of region sets. In this way, annotations from external data sources can be easily connected to new genomic data.
SOM Research Computing is working with faculty in the UVA Center for Public Health Genomics to implement LOLAweb, an online tool for performing genomic locus overlap annotations and analyses. This project, written in the statistical programming language R, allows users to specify region set data in BED format for automated enrichment analysis.
